Ashley Chihttp://www.genome.duke.edu/people/faculty/chi/shapeimage_2_link_0
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BROWN LAB PUBLICATIONS


Chi JT, Rodriguez EH, Wang Z, Nuyten DS, Mukherjee S, van de Rijn M, van de Vijver MJ, Hastie T, Brown PO "Gene expression programs of human smooth muscle cells: tissue-specific differentiation and prognostic significance in breast cancers." PLoS Genet 2007; 3: 9: 1770-84.

Chi JT, Wang Z, Nuyten DS, Rodriguez EH, Schaner ME, Salim A, Wang Y, Kristensen GB, Helland A, Børresen-Dale AL, Giaccia A, Longaker MT, Hastie T, Yang GP, Vijver MJ, Brown PO "Gene Expression Programs in Response to Hypoxia: Cell Type Specificity and Prognostic Significance in Human Cancers." PLoS Med 2006; 3: 3: e47.

Nuyten DS, Kreike B, Hart AA, Chi JT, Sneddon JB, Wessels LF, Peterse HJ, Bartelink H, Brown PO, Chang HY, van de Vijver MJ "Predicting a local recurrence after breast-conserving therapy by gene expression profiling." Breast Cancer Res 2006; 8: 5: R6.

Chang HY, Sneddon JB, Alizadeh AA, Sood R, West RB, Montgomery K, Chi JT, Rijn Mv M, Botstein D, Brown PO "Gene Expression Signature of Fibroblast Serum Response Predicts Human Cancer Progression: Similarities between Tumors and Wounds." PLoS Biol 2004; 2: 2: E7.

Chi JT, Chang HY, Haraldsen G, Jahnsen FL, Troyanskaya OG, Chang DS, Wang Z, Rockson SG, van de Rijn M, Botstein D, Brown PO "Endothelial cell diversity revealed by global expression profiling." Proc Natl Acad Sci U S A 2003; 100: 19: 10623-8.

Chi JT, Chang HY, Wang NN, Chang DS, Dunphy N, Brown PO "Genomewide view of gene silencing by small interfering RNAs." Proc Natl Acad Sci U S A 2003; 100: 11: 6343-6.

Whitfield ML, Finlay DR, Murray JI, Troyanskaya OG, Chi JT, Pergamenschikov A, McCalmont TH, Brown PO, Botstein D, Connolly MK "Systemic and cell type-specific gene expression patterns in scleroderma skin." Proc Natl Acad Sci U S A 2003; 100: 21: 12319-24.

Chang HY, Chi JT, Dudoit S, Bondre C, van de Rijn M, Botstein D, Brown PO "Diversity, topographic differentiation, and positional memory in human fibroblasts." Proc Natl Acad Sci U S A 2002; 99: 20: 12877-82.