Joe Derisihttp://derisilab.ucsf.edu/shapeimage_2_link_0
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BROWN LAB PUBLICATIONS


Shepard KA, Gerber AP, Jambhekar A, Takizawa PA, Brown PO, Herschlag D, DeRisi JL, Vale RD "Widespread cytoplasmic mRNA transport in yeast: identification of 22 bud-localized transcripts using DNA microarray analysis." Proc Natl Acad Sci U S A 2003; 100: 20: 11429-34.

Kuhn KM, DeRisi JL, Brown PO, Sarnow P "Global and specific translational regulation in the genomic response of Saccharomyces cerevisiae to a rapid transfer from a fermentable to a nonfermentable carbon source." Mol Cell Biol 2001; 21: 3: 916-27.

Miki R, Kadota K, Bono H, Mizuno Y, Tomaru Y, Carninci P, Itoh M, Shibata K, Kawai J, Konno H, Watanabe S, Sato K, Tokusumi Y, Kikuchi N, Ishii Y, Hamaguchi Y, Nishizuka I, Goto H, Nitanda H, Satomi S, Yoshiki A, Kusakabe M, DeRisi JL, Eisen MB, Iyer VR, Brown PO, Muramatsu M, Shimada H, Okazaki Y, Hayashizaki Y "Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays." Proc Natl Acad Sci U S A 2001; 98: 5: 2199-204.

Hayward RE, Derisi JL, Alfadhli S, Kaslow DC, Brown PO, Rathod PK "Shotgun DNA microarrays and stage-specific gene expression in Plasmodium falciparum malaria." Mol Microbiol 2000; 35: 1: 6-14.

DeRisi J, van den Hazel B, Marc P, Balzi E, Brown P, Jacq C, Goffeau A "Genome microarray analysis of transcriptional activation in multidrug resistance yeast mutants." FEBS Lett 2000; 470: 2: 156-60.

Khodursky AB, Peter BJ, Schmid MB, DeRisi J, Botstein D, Brown PO, Cozzarelli NR "Analysis of topoisomerase function in bacterial replication fork movement: use of DNA microarrays." Proc Natl Acad Sci U S A 2000; 97: 17: 9419-24.

Ogawa N, DeRisi J, Brown PO "New components of a system for phosphate accumulation and polyphosphate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis." Mol Biol Cell 2000; 11: 12: 4309-21.

Wilson M, DeRisi J, Kristensen HH, Imboden P, Rane S, Brown PO, Schoolnik GK "Exploring drug-induced alterations in gene expression in Mycobacterium tuberculosis by microarray hybridization." Proc Natl Acad Sci U S A 1999; 96: 22: 12833-8.

Gerton JL, Ohgi S, Olsen M, DeRisi J, Brown PO "Effects of mutations in residues near the active site of human immunodeficiency virus type 1 integrase on specific enzyme-substrate interactions." J Virol 1998; 72: 6: 5046-55.

Marton MJ, DeRisi JL, Bennett HA, Iyer VR, Meyer MR, Roberts CJ, Stoughton R, Burchard J, Slade D, Dai H, Bassett DE, Hartwell LH, Brown PO, Friend SH "Drug target validation and identification of secondary drug target effects using DNA microarrays." Nat Med 1998; 4: 11: 1293-301.

Lutfiyya LL, Iyer VR, DeRisi J, DeVit MJ, Brown PO, Johnston M "Characterization of three related glucose repressors and genes they regulate in Saccharomyces cerevisiae." Genetics 1998; 150: 4: 1377-91.

Chu S, DeRisi J, Eisen M, Mulholland J, Botstein D, Brown PO, Herskowitz I "The transcriptional program of sporulation in budding yeast." Science 1998; 282: 5389: 699-705.

Lashkari DA, DeRisi JL, McCusker JH, Namath AF, Gentile C, Hwang SY, Brown PO, Davis RW "Yeast microarrays for genome wide parallel genetic and gene expression analysis." Proc Natl Acad Sci U S A 1997; 94: 24: 13057-62.

DeRisi JL, Iyer VR, Brown PO "Exploring the metabolic and genetic control of gene expression on a genomic scale." Science 1997; 278: 5338: 680-6.